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… for growth yet essential for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and …

… learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … phylogenetic tree for  Dothideomycetes . The data allowed the team to reclassify 25  Dothideomycetes species, …

The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the …

The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the …

… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint … What started with 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each … that they can deliver these programs to our students.”   Following this, several internship program committee members …

As part of the JGI’s 25th anniversary celebration, the 2022 Annual … featured speakers who shared a look back at the JGI’s history, from its beginnings in the sequencing for the Human … JGI’s future. Find recordings and recaps of these talks below, starting with Ari Patrinos. The Genomics Arms Race Ari …

… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … boost yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office building, its … Science of the U.S. DOE under Contract No. DE-AC02-05CH11231 within the framework of CSP 1974 “1KFG: Deep-sequencing …

Researchers looked across many organisms to see that aminotransferase enzymes have evolved … characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … the functional versatility of ATs. This replacement has allowed AT enzymes to evolve in complex ways.  Finally, to …

… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …

JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … technology O’Malley developed. Unique Capability DAP-seq allows researchers to identify all the sites where …

High-throughput stable isotope probing helps ID novel interactions between bacteria … The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … SIP places samples into standardized microwell plates, allowing them to be processed at a larger scale through …

DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … was back on campus at the University of California, Merced to start orientation as a first-year graduate student in the … In Visel’s group, Olmstead worked with postdoctoral fellow Ben Cole on a project involving bacteria in Arabidopsis …