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Supercharging SIP in the Fungal Hyphosphere
… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … did not. This is normally an arduous wet lab process. Typically, after incubating microbial communities with labeled …
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The Case for Conservation
… is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single set of chromosomes, are available. The genome assemblies …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … algae? You now have one place where you can browse the genetic blueprints of these photosynthetic organisms. PhycoCosm …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … algae? You now have one place where you can browse the genetic blueprints of these photosynthetic organisms. PhycoCosm …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … paper in the journal PLoS One . “Puerto Nuevo is, historically, a fishing town and we know little about its coastal … and positively, influenced the bioinformatics skillset I have today. I didn’t know anything about Principal …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a … that will help solve energy and environmental ch allenges. Methane emissions are a massive factor driving climate … methane emissions actually come from livestock — specifically, from the methane-making microbes within their rumen. …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … that feels especially relevant to living on a changing planet. Transcript for Audio Two special days occur in April: … that’s just a little west of Fort Collins, near a city called Leadville. ED:   And, uh, Leadville is interesting. …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … with the photobiont transferring part of its photosynthetically fixed carbon to the mycobiont. However, despite a … could help improve crop drought resilience. It’s a superpower even Marvel’s Brock/Venom would envy. … This work was …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… and farmers around the country recognize that crop varieties grow best in certain regions. Most plant species have … crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … me a truck and I drove all over Texas with a shovel,” recalled study co-author David Lowry, who started as a …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … hover just above. Described as a “river of grass” that stretches some 580,000 square miles across southern Florida, … scientific journal. It was gratifying to see the empowerment displayed across each of their faces.” …
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Training the Next Generation of Talent
New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … technologies, but there was no mechanism for it,” he recalls. He arranged a meeting with the SNS dean, Juan Meza , …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… bioeconomy, leveraging partnerships to advance foundational science, creating opportunities for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … Plan: Innovating Genomics to Serve the Changing Planet (download a copy at jointgeno.me/2024StrategicPlan .) …
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