Search

… Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other … (Danforth Center) drove up and down the highways of the continental United States, occasionally pulling over to the side …

… in environmental processes (related to interactions of soil-sediment environments, water and air-atmosphere with … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples … The researchers then pursued the Nha-C strain for further study, tagging the cells with individual fluorescent probes. …

… Back in 2011, JGI-supported researchers published a paper in the … to identify over 27,000 microbial genes. The data from that study is now used across California State University … the chair of the JGI User Executive Committee, on how that study went from the lab to the classroom. …

… Mini-Metagenomics Approach Helps Identify Novel Archaeal … were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of … is typically observed, but to the “TACK” superphylum,” said study first author Bojk Berghuis. “This provided us with …

… Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and contribute to ongoing projects. In one … way or another, they’ve all mentioned how invaluable their time at the JGI was and how great it was to have an …

… By characterizing the structure and function of a methylthio-alkane … reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes excel … innovation ecosystem. “At JGI, we’ve done the synthesis, metagenome mining, all the way from sequencing to functional …

… Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a changing planet. Mo Kaze is a University of … and metabolism, work on which she is expanding with her study of microbes in California’s manmade water transport …

… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI … experiences below. Name: Noelle Anderson Class Year: At the time of the internship, 4th year PhD student in Quantitative … in industry or academia. It was also a great opportunity to study and learn something totally new during my Ph.D. What …

… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … abilities to adapt to extreme environments such as poor soils and drought. The reference genome for M. sinensis, and … history and perennial lifecycle makes it important to study directly. The large and complex genome of M. sinensis …

… are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages … are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Almost all … wastewater, and even animal and human (for the first time) gut and taxonomically classified into 27 distinct …

… This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time out in the field, work at the lab bench, and also do …

… MGEs, that can move between organisms. But now, deep sequencing and new analysis methods are bringing this mobilome into light, and opening up new options … Simon Roux (JGI) as they talk about their recent work on a time series from Sweden’s Stordalen Mire. …