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Biotech Partners Summer Intern Co-Authors NAR Paper
Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint … the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has … to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
Back in 2011, JGI-supported researchers published a paper in the journal … genes. The data from that study is now used across California State University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear …
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Crops as Tough as World Cup Turf
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group … develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software includes: gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides …
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A Complex Confection Decoded: Sugarcane Reference Genome
… most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … in order to form a single cohesive image. An approximately nine billion base (Gigabase or Gb) reference genome for the …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision … to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
… group at Berkeley Lab created a fabricated ecosystem – an EcoFAB. These small plastic growth chambers let researchers around the world compare their work consistently. And EcoFABs … in the classroom. This episode, we visit Los Medanos Community College to see EcoFABs in action in Jill Bouchard’s BIO …
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A Mentor’s Perspective on Training the Next Generation
Over the years, hundreds of interns have come to the JGI from all parts of the globe … they’ve all mentioned how invaluable their time at the JGI was and how great it was to have an experienced career …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… scientists from academia, industry, and government organizations for three days of scientific presentation, interactive panel discussions, workshops, and informal networking events. JGI will present both a genome center talk and a tech talk. …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about how the Adopt-A-Genome project … and Mark Soghomonian share what it was like to take on one of these genomes.  …
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Danielle Goudeau
Danielle operates the single-cell genomics pipeline for JGI … analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She also develops novel flow cytometry protocols for targeted recovery of specific microbes. …
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