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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE … from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab … for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… On February 8, 2024, the DOE Joint Genome Institute and the … FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The FICUS call allows researchers to combine the power of genomics and molecular characterization from the JGI and …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding … The Science Haloarchaea flourish in hypersaline environments, and researchers are interested in learning how … in Antarctic lakes, some of which have salinities 10 times that of seawater. To shed light on the global …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of … a genus of just under 400 mosses that can carry up to 25 times their dry weight in water, makes up the overwhelming … (A.J.S.) conducted by the US Department of Energy (DOE) Joint Genome Institute ( …
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, … Yasuo Yoshikuni is the DNA Synthesis Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of …
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A Complex Confection Decoded: Sugarcane Reference Genome
… Sugarcane was the last major crop without a reference quality … most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … more than a decade because there were pieces from multiple boxes, including some duplicates, to sort through in order …
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Gene Expression: From On-Off Switch to Dial
… Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science … to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of gene … This work was funded by the Air Force Office of Scientific Research under Award No. …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the terpene synthase gene family across eucalypt … This work was supported by the Australian Research Council (grant … Sequencing and assembly data carried out by EMBRAPA as part of the  Corymbia  genome project was supported by FAPDF …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The … In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … work was partially supported by awards from US Department of Energy (DOE) Office of Science, Office of Biological and …
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The fungus that made itself at home
… Retracing how the dry rot Serpula lacrymans adapted to a new … habitat. The Science By comparing genetic information from similar organisms, researchers have gained insights … plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  … . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … a task that requires a flathead screwdriver with a full toolbox including Phillips and specialty screwdrivers, not to …
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