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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… look back at the JGI’s history, from its beginnings in the sequencing for the Human Genome Project out to the future of … he admitted that boiling that portfolio’s impact down into a succinct message was quite a challenge. “The default … not so unexpected given JGI’s remarkable ability to adapt to a changing scientific and technological landscape.” …
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A framework genetic map for Miscanthus sinensis from RNAseq-based markers shows recent tetraploidy
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Genetic dissection of natural variation in oilseed traits of camelina by whole‐genome resequencing and QTL mapping
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Cultivating Symbiotic Antarctic Microbes
… biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … that contribute to carbon cycling, and is interested in understanding the genomic basis and ecological consequences … been able to gain further insights about how microbes have adapted to thrive in polar ecosystems. The work by …
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Expanding Virophage Diversity
… viruses. Almost all known virophage genomes share only four genes in common: major and minor capsid proteins (MCP and … increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By … human (for the first time) gut and taxonomically classified into 27 distinct clades (17 of them without previously known …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their potential … vital to facilitate the assembly of small DNA fragments into larger and coherent pieces called contigs — into genes … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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Igor Grigoriev
… Russia PhD in Molecular Biology, Research Institute for Genetics and Selection of Industrial Organisms, Moscow, … 7(9):1419-1430. Ye et al (2022) The role of zinc in the adaptive evolution of polar phytoplankton.  Nature Ecol Evol … Miyauchi et al (2020) Large-scale genome sequencing of mycorrhizal fungi provides insights into the …
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Publication Policy
… acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … many staff are involved in processing samples and data generation according to SOPs.  For each individual user …
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High Density Genetic Maps of Seashore Paspalum Using Genotyping-By-Sequencing and Their Relationship to The Sorghum Bicolor Genome
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A genetic linkage map for the ectomycorrhizal fungus Laccaria bicolor and its alignment to the whole‐genome sequence assemblies
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Genetic mapping and prediction of flowering time and plant height in a maize Stiff Stalk MAGIC population
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… As warm-adapted microbes edge polewards, they’d oust resident tiny … than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem … research cruises, they dipped their self-closing containers into sea water to sample algal communities along transects …
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