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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… the bridge to help scientists and researchers achieve their analysis goals. Offering this tool establishes the JGI as a … attempt to put them back into the original genomes. These metagenome-assembled genomes (MAGs) that came from shotgun … like plasmids, the picture is far from complete.  In 2021 , scientists at St. Jude Children’s Research Hospital …
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JGI Early Career Researchers Featured in mSystems Special Issue
… article, Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … has advanced drastically, aided by genome assembly from metagenomes. This is a critical step toward better … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Genome analysis of ‘Candidatus Ancillula trichonymphae’, first representative of a deep‐branching clade of Bifidobacteriales, strengthens evidence for convergent evolution in flagellate endosymbionts
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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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Analysis of the Neurotoxin Complex Genes in Clostridium botulinum A1-A4 and B1 Strains: BoNT/A3, /Ba4 and /B1 Clusters Are Located within Plasmids
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Ben Bowen
… and integrating mathematics and chemistry for advanced analysis, modeling, and data integration. Dr. Bowen’s … J., Northen, T., & Bowen, B. (2017). OpenMSI Arrayed Analysis Toolkit: analyzing spatially defined samples using … T., Wang, T., Ruebel, O., Northen, T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance …
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A Grass Model to Help Improve Giant Miscanthus
… the perennial grass Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into … crops such as sugarcane and sorghum. The M. sinensis genome analysis explains the hybrid origin of giant miscanthus ( M. … kind of underground stem, the rhizome, that stores nutrients from one growing season to the next. By studying …
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Eelgrass Proves to Be Much Younger Than We Thought
… — including the eelgrass genome assembly that enabled analysis of the whole genome duplication event — … Energy Joint Genome Institute Community Sequencing Program (CSP 502951, 2016, Population and evolutionary genomics of …
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MGM Workshop at Fisabio Summer School 2025
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Exploring Possibilities: 2022 JGI-UC Merced Interns
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JGI Scientists Pen Genome Watch Articles
… characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal RNA gene censuses.  Emiley Eloe-Fadrosh ,  Metagenome Program lead, shone a spotlight on  ammonia … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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A novel open-source cultivation system helps establish the first full cycle chemosynthetic symbiosis model system involving the giant ciliate Zoothamnium niveum
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