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W. Berkeley Kauffman
… to improve the JGI’s capabilities in the areas of metagenomics, single-particle genomics, and metabolic engineering. …
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Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
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Genome Sequence of Thermofilum pendens Reveals an Exceptional Loss of Biosynthetic Pathways without Genome Reduction▿ †
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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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A Practical Approach to Using the Genomic Standards Consortium MIxS Reporting Standard for Comparative Genomics and Metagenomics
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Worldwide Population Genomics Reveal Long-Term Stability of the Mitochondrial Genome Architecture in a Keystone Marine Plant
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… in coastal sediments,” said Woyke, who also heads the JGI’s Microbial Program and is one of the article’s senior … the entire cell.” The JGI team then used single cell genomics to analyze five of the bacterial cells on the … paradigm of what constitutes a bacterial cell and advances microbial research.” One Giant Bacterium, Multiple Research …
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Danielle Goudeau
… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of … Obsidian Pool hot spring. The researchers applied mini-metagenomics to these samples by sorting the microbes into …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… To search environmental data, they developed a two-stage metagenomic detection pipeline: First, they scanned over 26,000 publicly available metagenomes in the JGI's IMG portal for mitochondrial …
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Genomic variation and biogeography of Antarctic haloarchaea
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