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Len Pennacchio
… joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging questions existing in biology. He holds joint appointments as a … of a rare form of human epilepsy and subsequently generated one of the first mouse models for this common neurological …
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Scaling Up Existing Skill Sets
… opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 interns, … Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial Interactions What effect has your summer …
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Webinar: PhycoCosm Tutorial
… about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would your Tree ever … that should be ok generally. We can work with you to re-map the data. If your rna-seq data doesn’t necessarily …
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JGI announces 2024 New Investigator portfolio
… we look for novel research projects — aligned with DOE missions and from PIs who have not led any previously-accepted … of desert grasslands to the metabolic savviness of microbial ecosystems at the forest floor and along ocean shores. Their results could bring key insights …
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10 From JGI on the 2019 Highly Cited Researchers List
… Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited … Animal Science and Molecular Biology & Genetics categories Microbial Systems research group lead and User Programs Deputy Susannah Tringe, Cross-Field category Microbial Program head Tanja Woyke , Biology & Biochemistry …
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The Expanding Universe of Methane Metabolisms in Archaea
… Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea … issue of Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained … genes for both pathways had never been observed in a single microbial population until now. Ca.   M. washburnensis was …
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JGI announces 2025 Functional Genomics awardees
… Olufemi Isimikalu, Todd H. Oakley, BJ Philmus and Aaron M. Roshotte; [Below] Paul Scesa, Kathleen Scott, Tiffany … woody bioenergy crops through transcriptional network mapping, developing microbial systems to convert renewable feedstocks into …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant … But scientists have wondered exactly how the microbial community carries out its helpful metabolism: …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared … Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Functional Characterization of Two Class II Diterpene Synthases Indicates Additional Specialized Diterpenoid Pathways in Maize (Zea mays)
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … of Science User Facility. Y. lipolytica is a tantalizing microbial factory, capable of turning abundant biomass … under grant  N00014-15-1-2785 . JW acknowledges additional support from the National Science Foundation Graduate …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped … mats — to reveal how these systems adapt and contribute to global biogeochemical cycles. Additional efforts in metabolic engineering and biocatalyst design …
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