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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics … your Tree ever differ from NCBI Taxonomy? A(nswer): If you find that our trees are incorrect or need to be changed, please contact us and we’ll … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month events throughout April. This year, a new group at the Lab, the Sustainable Garden Club, hosted a DIY Succulent Workshop and … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Waiting to Respire
… development of multicellular organisms. Not all bacterial lineages harnessed aerobic respiration when the Cyanobacteria … fellow Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed Margulisbacteria, … The research teams opted to collaborate on a single study, with Matheus Carnevali and Schulz sharing co-first …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … outline the questions they asked – and answered – in the study that recently appeared in the Proceedings of the … ecological and evolutionary consequences. A previous study conducted by our research team surveying the genomic …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant … Emerald Nash : What I’m working on here is an experimental study of root colonization by resident phages of a plant …
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using surprisingly few enzymes. The … maize. By deciphering the zealexin synthesis pathway, this study makes it possible to harness the protective function … maize, which has been largely overlooked, according to the study’s senior author Alisa Huffaker, a biologist at the …
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2025 NeLLi Symposium
… fees: Regular attendees  (LBNL and external): $400  Industry: $450  Students and postdocs (including LBNL students and postdocs): $250      Hosted by the DOE … will be held on November 4 at the National Atomic Testing Museum at the Desert Research Institute. Metagenomic and …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal … were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of … is typically observed, but to the “TACK” superphylum,” said study first author Bojk Berghuis. “This provided us with …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant … to learn more about the program's areas of focus, major initiatives and more.  …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from … the family tree for Lentinula. Within those samples, this study also tracks the enzymes these fungi use to break down … the GENOBIOREF (BIO2017-86559-R) project of the Spanish Ministry of Science and Innovation (cofinanced by FEDER …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw … can be further explored for novel functions. In the current study, the team combined the CETCH cycle with a …
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