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The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
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Genome analysis of the marine bacterium Kiloniella laminariae and first insights into comparative genomics with related Kiloniella species
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The first two chromosome‐scale genome assemblies of American hazelnut enable comparative genomic analysis of the genus Corylus
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A chromosome-level genome assembly of the varied leaved jewelflower, Streptanthus diversifolius, reveals a recent whole genome duplication
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… second fiddle to those from fungi when it comes to breaking down tough plant fibers. The Science Walk in a temperate … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … on the other hand, appear to be ignoring these difficult potential foodstuffs. The team’s findings also illustrate …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The … protein. Researchers demonstrated the efficacy and potential of regulon identification by in vitro … in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s … archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes … diverse substrates, and also photosynthesis genes including potential light-driven proton pumps. “We’re seeing that this …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … considers this to be a candidate bioenergy crop for its potential production of biomass on marginal lands not usable …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users … hundreds of related species, meaning these insights are potentially broadly applicable. The findings hold the … Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user …
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Complete Genome Sequence of Nitrobacter hamburgensis X14 and Comparative Genomic Analysis of Species within the Genus Nitrobacter▿ †
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The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution
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The Surprising Structure of a Shrub Willow Sex Chromosome
… the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. … relative  Populus trichocarpa,  or the poplar tree, are potential biofuel feedstocks of interest to the U.S. … Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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