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… predictive models on how climate change may impact marine microbes and by extension, the ocean’s capacity to act as a … flux in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former postdoctoral fellow … saw populations shift. Smaller picoplankton and free-living microbes that can fix carbon dioxide replaced organic matter …

Cone Snail  Californiconus californicus (and cone snails in general) outside of mostly anecdotal information,” Ul-Hasan … has a number of applications, including pain relief. The microbes in cone snails may be involved in venom activity, … between the two institutions to help train the next generation workforce. Co-advised by JGI Microbial Program …

… biodiversity. Using publicly available genome sequence data generated over the past three decades, their study assesses … said co-first author Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data … art of hands-on microbiology and experimental validation.  Microbes run the world, playing key roles in regulating …

… of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on Microbial Root … … Clustering Scalable … Cataloging Lineage Specific Conserved Genes in Giant Viruses … Pan-genome Graphs: Approaches for … Categorization of Genomic Variations … Comparative and Functional Genomic Analysis of Genus Roseovarius … …

Crete, Greece … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . … Camargo AP. et al. (2023) Identification of mobile genetic elements with geNomad. Nat Biotechnol . Epub. Neri … of Human Microbiomes Reveal Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | …

… authors of the  paper published April 20, 2020 in  Nature Genetics include Jane Grimwood and Jeremy Schmutz of JGI’s  … provides breeders with insights on crop improvements at a genetic level, including why having multiple copies of their … disciplines that relate directly and indirectly to genetic diversity, evolution, wild germplasm utilization and …

… of flowering plants multiply. Over time, plants lose many genes after such events, returning their genomes to a diploid state while retaining multiple copies of some genes. This polyploidization process is ongoing and many … after polyploidization,” said John Vogel, head of the Plant Functional Genomics program at the JGI and a senior author …

… genomes’ metabolic pathways could lead to the discovery of genes that could be used for multiple biotechnological … moss sex chromosomes continue to evolve so rapidly in gene content and structure. He and JGI Plant Program head … improve crop breeding. For example, Schmutz noted, specific genes of interest could be associated with a plant’s sex. …

… of metagenome-assembled viral genomes . The Impact The microbes that play key roles in cycling nutrients such as … limits the ability of researchers to accurately perform functional assessment, host prediction, and phylogenetic analysis. The development of CheckV helps …

… currently works to support understanding of plants, microbes and environmental communities that have relevance … on, from the myriad of omics analyses for understanding gene expression in plants and the environment, to the JGI’s … in 2006 when the JGI transitioned from human to microbial genetics. Drell held the role until he retired in 2018. …

… work on which she is expanding with her study of microbes in California’s manmade water transport canals. … between the two institutions to help train the next generation workforce.     … The U.S. Department of Energy … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …

… dark matter”–that uncultured and unknown majority of microbes in, on and around the planet–through techniques …