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JGI@25: Mapping Switchgrass Traits with Common Gardens
… our collaborations and capabilities to enable great science that will help solve energy and environmental … portal Phytozome. The combination of field data and genetic information has allowed the research team to associate … Just as the common gardens have flourished, so has the community of switchgrass researchers grown. After almost two …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to … University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear … Professor Matthias Hess, also the chair of the JGI User Executive Committee, on how that study went from the …
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Exploring and Thinking Critically about Scientific Problems with JGI Interns
… While summer interns at the JGI from multiple programs had their own goals to achieve, they constantly collaborated with each other on new ways of presenting and researching science. …
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PhycoCosm Tutorial
… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative … Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… restoring and maintaining healthy soils – are at the heart of sustaining food and bioenergy security for a steadily … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … York Times 2022 List of Firsts as well as other year-end science discovery lists.  Updates to the Genomic … on giant virus diversity, and how sequencing and bioinformatics have sped up the study of giant viruses.  …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with excitement and determination as they came onsite. From data carpentry to science communications, their schedules were filled with … Carlos Vazquez and mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan …
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Accelerating Metagenomics Discoveries with Deep Learning
… insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … (CRD), in order to create more useful tools for the bioinformatics community. Other work presented at the workshop included how … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … and Tanja Woyke, were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . … sequences. Roux was first author on a study featuring a new program called iPHoP , which combines and evaluates multiple …
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Triggering Morel Fruiting
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on just how morel fruiting is … Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following … by the black morel, as well as the gene-expression programs encoding the biochemical processes unveiled by …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … But scientists have wondered exactly how the microbial community carries out its helpful metabolism: who’s … findings in the  Proceedings of the National Academy of Sciences . The team focused on the dominant bacterial clades …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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