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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … to their economies. It also plays an important role in soil health through nitrogen-fixation and holds clues for … P. vulgaris on Phytozome …
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what … their archaea and bacteria hosts. The Impact Within the domains of archaea and bacteria, millions of  microbes govern … data. In other environments, such as terrestrial soil, having additional isolates and metagenomic datasets …
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest … interact with their environment, potentially accelerating soil carbon loss. Orange ribbons mark the heated plots and … sequence for Eucalyptus grandis. Accessing recently burned soils in California and Colorado, Mike Wilkins of Colorado …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… For the last 15 years, Ray Turner has been one constant for the Joint Genome … dedicated “Ops Team” who dealt with leaky roofs, backed-up toilets, and ground squirrel infestations while working to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership between JGI and the … National Research Service Award (NRSA) Individual Postdoctoral Fellow, expanding her experimental repertoire to … Microbiology and Cell Science, University of Florida NIH Postdoctoral Researcher, UCLA …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A … tools for binning metagenome data involved with mainly eukaryotic origins were scarce. Thus, the genome and … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a …
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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … ecological Harvard Forest project, large datasets from soil microbiome studies collected across various terrains, … including oceans, lakes, mammalian guts, forests, and soils, ensuring a robust and representative training set for …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global cocoa bean … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User … Theobroma cacao on Phytozome Data Portal … HudsonAlpha scientists help secure the future of chocolate with improved cacao reference …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that allows researchers to …
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