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Informatics Advisory Committee
… by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is chartered to render advice, guidance, and counsel on the effective …
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Marianne Buscaglia
Marianne is an affiliate researcher who uses metagenomics to study giant viruses in cold marine environments and is …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and … Remarkable Similarity Despite Vast Diversity For this study, researchers collected soil samples from four sites: … mycorrhizal symbionts shuttle water and nutrients to trees; plant pathogens colonize living plants to feed on them.  …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved … the University of Massachusetts Amherst and colleagues are studying how chronic warming is altering how microbes …
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JGI Hosts GPU Hackathon in May
… (JGI), a DOE Office of Science user facility, aims to explore applications in the life sciences that can be ported to the GPU architecture. A GPU hackathon is a five-day … will be sent out. The main benefit is professional growth and development for the developers, and the code …
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Tomas Tyml
Tomas uses traditional cultivation methods along with microscopy and genomics to study endosymbiotic associations within microbial …
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Effects of Polar Light Cycle on Microbial Food Web
… with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the norm when it comes to nutrient cycling in polar regions. While microbial … aligned with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of …
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The Power of One, Amplified
… showed that single cell genomics can add significant value to the other commonly used culture-independent sequencing … cannot be cultivated in the lab. What makes this particular study unique is the application of single cell genomics to a … of friends, while another might exhibit few limitations to interactions and new connections, thus sharing more ideas, …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State University … Executive Committee, on how that study went from the lab to the classroom. …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While … in particular, as a model system for venom-microbe interactions. Cone snail venom has a number of applications, …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… site. The chemical PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via … mccartyi and  Dehalobacter restrictus,  that work together to break down PCE into the chemical compound … adjusting the environmental conditions to encourage their growth. In this instance, vegetable oil was injected into a …
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JGIota: The Algae Nicknamed ‘Chlamy’
… alga – Chlamydomonas reinhardtii – that’s managed to have a big impact. UC Berkeley plant biologist Sabeeha Merchant explains why she works on … and what it has to teach us about other organisms – like plants. [ Editor’s Note: Merchant is also a faculty …
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