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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … Lab. Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in … properties, communities and ecosystems.” Building off multiple collaborations, Lab researchers working with the …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … , and relying on the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . By analyzing the metagenomes, … #3777 (to EFD). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth … & Evolution of Self-Catalytic Introns across Earth’s Microbiomes Sonia Vargas and mentors Tomas Tyml and Frederik … huge amounts of data. I was excited to work on fungal genomics and the fact that I got to do a project involving over …
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems design … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… A special issue of Synthetic Biology celebrates research enabled by the JGI … large-scale synthesis support, sequencing, integrative -omics, and data mining, empowering research collaborators to … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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Emiley Eloe-Fadrosh
… her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … Program Lead position in 2017. She also leads the DOE’s multi-lab National Microbiome Data Collaborative (NMDC). …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … that DGRs are not only widespread, but also surprisingly active. In viruses, DGRs appear to generate diversity … who led the research team and is the head of the Viral Genomics group at the JGI, thinks that if you’re a virus or a …
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New Research Sheds Light on Diversity in the Deep Sea
… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … five oceanic regions. In doing so, they found a high degree of variability in the types of microorganisms that inhabit … are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published in the  …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science Researchers … a candidate bioenergy feedstock with a complex genome with multiple copies of its chromosomes. Switchgrass has deep … that allow it to access nutrients easily from a variety of soils and has a high tolerance of extreme water conditions …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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JGI Scientists Pen Genome Watch Articles
… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature … published January 27, is about engineering plants and their microbiomes for more sustainable agriculture and was written …
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