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Graduate Students Get Thesis Research Opportunity at the JGI
Twice a year, the DOE Office of Science Graduate Student Research … to answer our most pressing problems. I’m very much looking forward to working with JGI and LBNL scientists and have … in wetland carbon cycling and the interactions of plants with their associated microbiomes. Tringe was also …
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Four amino acids define the CO2 binding pocket of enoyl-CoA carboxylases/reductases
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Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to … dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” morphology, this means using … Berkeley National Laboratory (Berkeley Lab), has looked for DGRs in a broad range of publicly available datasets. …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC … than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut from mutually beneficial to … ways to protect poplar and other crops being considered for bioenergy feedstock development. Summary With the aim of …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes … mycorrhizal symbionts shuttle water and nutrients to trees; plant pathogens colonize living plants to feed on them.  …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … the ability to break down hardy plant cell walls and therefore hold clues to how humans could do the same on an … many scientists.”  Using samples of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… workshop held during the June 2022 CROPS Conference at the HudsonAlpha Institute for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of …
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Viral potential to modulate microbial methane metabolism varies by habitat
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Microbiome composition modulates secondary metabolism in a multispecies bacterial community
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A new-to-nature carboxylation module to improve natural and synthetic CO2 fixation
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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