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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint … highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special … is more than just a funny word. The 500 species described within the group are responsible for roughly two-thirds of antibiotics, and a deeper … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science … by a growing human population and increasing demand for agricultural products.  Sorghum bicolor (L.) Moench is … to produce good yields under water limiting conditions. Epigenetic Control of Drought Response in Sorghum (EPICON) is a …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… A special issue of Synthetic Biology celebrates research … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … PI on this project. “I view the program as an excellent platform to build collaborative research initiatives.” Yasuo …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple … to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently evolved to establish symbiotic relationships with plants (mycorrhizae), and particularly how fungi that …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change impact on marine microbial … carbon from the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during and after The … This work was performed under the auspices of the Scientific Committee …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and … about the microbial communities deep underground, and before the pandemic, they took the JGI on a sampling field … The video complements a recently published paper with first author Amundson in the journal Microbiome . The …
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Styling for Safety: PPE, It’s the JGI Way
… PPE or Personal Protective Equipment is worn to minimize exposure to hazards that can cause workplace injuries and illnesses.  PPE … These injuries and illnesses may result from contact with chemical, biological, physical, mechanical, or other … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … type of food that was in the contaminated aquifer in 2007 to achieve this goal. In less than four years, parts of … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… developed chemiluminescent biosensors shed light on how bacteria function and colonize diverse environments. The … is found in nearly all types of bacteria and interacts with cell signaling networks that control many basic … in regulating microbial cellulose production and biofilm formation, which affects a number of environments, including …
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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between … successfully automated aspects of a commonly-used process for studying microbial communities, with results published in the  November 2022 issue … Work at Lawrence Livermore National Laboratory was conducted …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, … Microbiome Data Science Group led by Kyrpides. Since early 2020, people all over the world have been forced to confront the awesome power that viruses have to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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