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JGI Welcomes New UEC Members
… the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect … investigator who has been an active user of the JGI at any time in the past two fiscal years is eligible for election …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
In this short video, UC Merced undergraduate and graduate students share how their summer internship experiences have influenced their careers in … lab. And I find this really valuable because in this time that I’ve been in my PhD program, I’ve been really …
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an … an interactive browser that allows other researchers to study the genomes and predict the metabolic abilities of … also used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. Finally, they used the …
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Extracting the Secrets of Secondary Metabolites
… for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and CRAGE … researchers with a powerful addition to their toolkit to study gene function. As a demonstration, the researchers …
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Busting the Unbreakable Lignin
… of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a … order to do so is a resource-intensive process. Now, a new study shows how anaerobic fungi — the kind living in the … wasn’t quite accurate, and maybe anaerobic fungi living in soils or the guts of livestock were more capable than …
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her … I-MA et al. IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata. Nucleic … Palaniappan K, and Chu K. Maintaining a Microbial Genome & Metagenome Data Analysis System in an Academic Setting, …
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Biotech Partners Summer Intern Co-Authors NAR Paper
Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this summer … his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic locations and assign …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth … Community Science Project proposal with JGI, in which she’s studying a special kind of plant metabolism. This … podcast, Genome Insider. I’m Alison Takemura. See you next time. … The U.S. Department of Energy Joint Genome …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … and her own as an early career researcher. “We were able to study hydrocarbon biosynthesis at a scale that would … to address some of the most pressing challenges of our time. For more information, please visit  …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … with a published complete draft genome sequence. At the time, the vital global source of both protein and oil was …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper … of a genome sequence generated through the OGG. For a long time, C-fern has served as a model for studying ferns and for teaching plant biology. It is typical …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … outline the questions they asked – and answered – in the study that recently appeared in the Proceedings of the … Where did the 8X variant come from? Did they arise multiple times or does their broad distribution indicate multiple, …
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