Search

… For the first time in several years, the DOE Joint Genome Institute hosted … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant …

… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, …

… Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory … Lab), the National Energy Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), … community moving forward and to assemble, for the first time these large environmental  microbial data sets for JGI …

… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … categories: Catalog the human virome; Develop tools to study the human virome; Explore how the human virome … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , …

… A nuanced understanding of peat moss drives insight into carbon storage   The … peatlands store approximately one-third of the world’s soil carbon. The process to harvest energy-generating peat … a genus of just under 400 mosses that can carry up to 25 times their dry weight in water, makes up the overwhelming …

… The first time I did this internship in the summer of 2020, it was a time where the world literally stopped. …

… In the summer of 2015, Adam Session was a postdoc working at … strawberries you find at the market.” Session credited his time with Rokhsar (both during and after his time at the … These days, Session is starting his lab at Binghamton “studying polyploids and transposon evolution, expanding on …

… Stable Isotope Probing (SIP) is a powerful technique for studying microbial … more reusable, and more insightful, for the future of studying microbial communities.   …

… of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. … plant biologist at West Virginia University (WVU), led the study’s international team, which included scientists from … provided by the National Natural Science Foundation of China (31590821, 31561123001, 31500502, 41871044), National …

… view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex … ability to chart regulatory networks across evolutionary time and diverse plant lineages. Aligning with U.S. … hard to make them work for the kinds of plant samples we study — and even go beyond, putting four different species …

… forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  … that happen between tiny organisms (microbes) located in soils and water. MGEs like viruses and plasmids drive … currently has more than 700,000 plasmids from genomes, metagenomes and metatranscriptomes. To lower barriers to …

… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics … there a tool in this platform to search fungal genomes in metagenomes? A: Search in metagenomes is available from … e.g. erg-1 (instead of the Gene ID etc., which is sometimes not easy to find out) A: If these names are assigned …