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Discovery of 5‑Chlorotryptophan-Containing Antibiotics through Metabologenomics-Assisted High-Throughput Screening
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Cultivating Symbiotic Antarctic Microbes
… in environmental processes (related to interactions of soil-sediment environments, water and air-atmosphere with … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples … The researchers then pursued the Nha-C strain for further study, tagging the cells with individual fluorescent probes. …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… Back in 2011, JGI-supported researchers published a paper in the … to identify over 27,000 microbial genes. The data from that study is now used across California State University … the chair of the JGI User Executive Committee, on how that study went from the lab to the classroom. …
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Taking Stock of the Known and Unknown Microbial Space
… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … sequence data generated over the past three decades, their study assesses what fraction of the microbial diversity we … genes on nearly 2 million genomes, including isolates, metagenome-assembled genomes (MAGs) with varying quality …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the … algae. But human-induced climate change , a new study suggests, is displacing these important cold-water … of East Anglia (UEA, UK) and senior author of the study. “Prokaryotes are not capable of producing all the …
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Discovery and annotation of small proteins using genomics, proteomics, and computational approaches
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Strategies for Enhancing the Effectiveness of Metagenomic-based Enzyme Discovery in Lignocellulolytic Microbial Communities
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Discovery, Design, and Structural Characterization of Alkane-Producing Enzymes across the Ferritin-like Superfamily
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Three Join the JGI User Executive Committee
… of the University of California, Santa Barbara. They join eight other JGI users already serving on the UEC – go … is a staff scientist at PNNL and thrust lead on PNNL’s Soil Microbiome SFA. She serves as Secretary within the … in how microbes influence biogeochemical cycles in soils and sediments and plant-microbial interactions in …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, … on the  JGI Genome Portal .) The team has also been able to discover additional microbes that contribute to the cleanup … ) conducted by the U.S. Department of Energy Joint Genome Institute (JGI) ( https://ror.org/04xm1d337 ), a …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science … landscape of vertebrate genomes, which led to the discovery of thousands of genetic switches implicated in … our seven science program — their areas of focus, major initiatives and more.  …
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Discovery of photosynthesis genes through whole-genome sequencing of acetate-requiring mutants of Chlamydomonas reinhardtii
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