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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth … pores, water is moved into the atmosphere basically along its concentration gradient. So, the movement of water … they need. Karolina is working to better understand what genetic features make CAM possible. So, she’s studying …
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Uri Neri
Neri is a computational biologist who spends his days wrangling viral genomes and occasionally remembering to document his code. At JGI, he develops tools for … "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …
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Introducing New Members of the JGI User Executive Committee
… “you-wren”) of the University of Arizona! They join nine other JGI users already serving on the UEC – go here … to this problem.” He also wants to assist JGI in extending its activity-based cell sorting pipelines to further the … noted, “I would also like to offer my insights in promoting diversity, equity and inclusion (DEI) in STEM disciplines to …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base … a methylation of the base cytosine at the 5th position on its carbon ring, or 5mC. In many organisms, 5mC is an … User Facility, and others like it, are uncovering the true diversity of the fungal kingdom. The abundance of fungal …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread their DNA, they can …
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Massie S. Ballon
… other JGI-relevant content on social media. She is also involved in the JGI’s community outreach efforts. Ms. Ballon has a … Area representatives to Berkeley Lab’s Inclusion, Diversity, Equity & Accountability (IDEA) Chairs Council.   …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s … expanded 10-fold from just 205 genomes, redefining the phylogenetic tree of giant viruses. Metabolic Reprogramming a …
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Benjamin Cole
Dr. Cole is interested in studying how plants interact with their environment. Prior to … how microbes can colonize plant roots, focusing on genetic components required for effective colonization. In …
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The Big Deal About Short Plants
Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome …
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to bioprospecting. The Science … tool for microbial ecologists to learn more about the diversity of microbial enzymes, which could have a plethora … on bacterial laboratory models to set a reference for its performance, and then applied it to environmental …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … fungi synthesize molecules that are sources of new chemical diversity; the team identified what looked to be three … fungal natural products, O’Malley and her team plan to use genetic tools to boost production and isolate the compounds. …
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