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Fungal Friends or Foes in Plant Roots
… plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act as … roots are akin to the ground floor lobby. People walking into the lobby have many reasons for being there, but … from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …
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Sequencing and Analysis of the Sex Determination Region of Populus trichocarpa
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Identification of synthetic consortia from a set of plant‐beneficial bacteria
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Diel partitioning in microbial phosphorus acquisition in the Sargasso Sea
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JGI@25: Fueling Investigation into Methane-Making Microbes
… in ways we are only just beginning to understand. A better understanding of rumen and the microbes that live there can drive solutions into stemming methane-emissions as well as efficient … to provide a cataloged and curated culture and genome sequence resource of rumen microorganisms . Thanks to the …
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Metabotyping as a Stopover in Genome-to-Phenome Mapping
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A Plantiful Future: Xiaohan Yang
Laboratory, believes they can. And, what’s more, that using gene editing technology to conscientiously mix traits of …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… impactful analysis of microbiome data that has changed our understanding of the microbiome and the microbial sciences … in natural ecosystems, and functionally explore viral genetic diversity.  In 2021, he was among those selected by …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… large and giant viruses offered the researchers insights into how they might interact with their hosts, and how those … genomes of uncultivated giant viruses from environmental sequences across the globe, then using these sequences to … more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, including …
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Jeremy Schmutz
… of the human genome project in 2003, he developed sequencing, assembly, and improvement strategies for de novo … MdS Hossain, J. T., Lovell, J. T.., et al. 2023. JGI plant gene atlas: an updateable transcriptome resource to improve … 1–24.Lovell, JT et al. 2021. Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass. Nature 590: …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for which quality DNA …
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The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea
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