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MycoCosm Tutorial
… comparative genomics and community annotation. Presented by Igor Grigoriev, Steven Mondo, Steven Ahrendt and Sajeet …
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Streamlining Regulon Identification in Bacteria
… Regulons are a group of genes that can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of regulon identification by in vitro transcription-sequencing (RIViT-seq) to … This work was supported by the U.S. Department of Energy Office of Science under …
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Silver age of GOLD introduces new features
… from public repositories, as well as project data entered by external users. The Impact One of the significant … Summary GOLD takes samples processed at the JGI, entered by external users and those imported from the public repositories and curates the information by applying community-developed standards. GOLD also …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… little makers rely on to survive. Now, new research enabled by the U.S. Department of Energy (DOE) Joint Genome … .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the entirety of a … to definitively prove two other archaea within the Thermoproteota phylum —  Korarchaeia and  Methanomethylicia   — …
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Kjiersten Fagnan
… team at the Supercomputing conference, SC’18, led by researchers at Oak Ridge National Laboratory. Dr. Fagnan … Analysis, 2018, pp. 717-730, doi: 10.1109/SC.2018.00060. Wood-Charlson, E.M., Anubhav, Auberry, D. et al. The … enabling microbiome science. Nat Rev Microbiol 18, 313–314 (2020). https://doi.org/10.1038/s41579-020-0377-0 S. Pau and …
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Dispatches From JGI Interns
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Defining the eco-enzymological role of the fungal strain Coniochaeta sp. 2T2.1 in a tripartite lignocellulolytic microbial consortium
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Draft Genome Sequence of Streptomyces sp. Strain Wigar10, Isolated from a Surface-Sterilized Garlic Bulb
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Draft genome sequences of Bradyrhizobium shewense sp. nov. ERR11T and Bradyrhizobium yuanmingense CCBAU 10071T
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Polynucleobacter meluiroseus sp. nov., a bacterium isolated from a lake located in the mountains of the Mediterranean island of Corsica
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Genome sequence of Bradyrhizobium sp. WSM1253; a microsymbiont of Ornithopus compressus from the Greek Island of Sifnos
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Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia
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