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Plotting a Model for Virus-Host Warfare Deep Below Ground
… subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s … oxygen deep below ground. These archaea fix carbon and nitrogen, but the viruses that infect Altiarchaea cause the … code for CRISPR systems, which help bacteria resist foreign genetic elements by incorporating short sequences from …
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A Natural Mechanism Can Turbocharge Viral Evolution
… that had in their genomes a surprising tool: a “diversity generating retroelement,” or DGR. The DGR could mutate the … but also surprisingly active. In viruses, DGRs appear to generate diversity quickly, allowing these viruses to target … on why the rapid injection of mutations in a particular gene might boost an organism’s fitness. Moreover, the …
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VEGA Symposium
… here  Registration fees:  Early Bird rates available now General & Berkeley Lab Attendee – $250 Students & Postdocs – $200 Regular Rates (begin September 19, 2026) General & Berkeley Lab Attendee – $300 Students & Postdocs – … in natural ecosystems, and functionally explore viral genetic diversity toward innovative biotechnological and …
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Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits
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Ectomycorrhizal fungi enhance pine growth by stimulating iron‐dependent mechanisms with trade‐offs in symbiotic performance
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Partnerships: Myco-Ed
… species.  Students collect fungi, sterilize tissue, isolate genes and more. The metadata then goes into iNaturalist. …
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Simon Roux
… The ISME Journal 15, 1569–1584. Nayfach et al., 2020. CheckV assesses the quality and completeness of … biomes. Nature Microbiology 4, 1895–1906. Schulz et al., 2020. Giant virus diversity and host interactions through … 2021 Thomson Reuters Highly Cited Researcher (Cross-field), 2020 LBNL Early Career LDRD, 2018 Senior Editor: …
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Mining Metagenomes for Cas Proteins
… The ability to accurately edit genomes (that is, repair gene mutations, and either delete or add genes in a precise fashion) has applications across many areas. In particular, gene editing is being used to develop drought, flooding, …
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Biodesign
… into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, … JGI Biodesign platform enables users to validate hypotheses generated from mining genomic data by designing and …
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Synthetic Biology Open Language (SBOL) Version 2.2.0
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Proteome insights into the symbiotic relationship between a captive colony of Nasutitermes corniger and its hindgut microbiome
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Serendipita Fungi Modulate the Switchgrass Root Transcriptome to Circumvent Host Defenses and Establish a Symbiotic Relationship.
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