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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among those … featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an …
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JGI Accepts 17 Proposals for Community Science Program
… State University and colleagues aim to understand how soil microbiomes in fire-adapted ecosystems respond to low and …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading … Their research, published in  August 2023 in  Nature Plants , was able to assess absolute time estimates for …
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Publication Policy
… products produced through all user projects accepted FY22 and later. … produced through all user projects accepted before FY22. …
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Natural Prodcast Episode 22: Alison Narayan
… has to do with the mechanism. And so these enzymes use O2, and one of those oxygen atoms gets incorporated into our product, and one of those oxygen atoms from O2 ends up as a molecule of water. DAN UDWARY: Mhm. So … Chemoenzymatic Tropolone Synthesis”, (preprint)  ChemRxiv.  2023.   doi: 10.26434/chemrxiv-2023-lvngd “Enabling Broader …
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An Addiction Crucial to a Fungus’ Reproduction
… endobacteria, the Rhizopus fungus cannot act as a plant pathogen, it cannot reproduce asexually, and … the host. Using the mutualistic relationship between the plant pathogenic fungus Rhizopus microsporus (Rm) and … JGI team sequenced and annotated a host genome (Rm ATCC 52813) as part of the 1000 Fungal Genomes project. As …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… could be generating these observed patterns. As many other plant species have natural cytotype variation, we also hoped … hundreds of naturally-occurring genotypes (in this case, a plant’s complete genetic makeup) and 10 common gardens. We … like switchgrass respond to pronounced climate shifts. (C4 plants use a more efficient form of photosynthesis that …
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Triggering Morel Fruiting
… carbon from lignocellulosic-abundant matters such as plant litter and to incorporate the assimilated carbon into the soil, reducing the amount of CO2 emissions from decaying leaves and woods into the … assistance from co-habitant microorganisms were unmasked. Plant polysaccharides such as starch and cellulose were …
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JGIota: Looking Back at Methane-Making Microbes
… from gut microbes — the bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those …
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Webinar: PhycoCosm Tutorial
… to be changed, please contact us and we’ll work work it out 2.  Q(uestion): Do you publish the data sets the trees are … devoted to algae (photosynthetic eukaryotes not including plants), so populated by algal genomes thus defined. We also have some reference plant genomes to help with comparative studies of algae and …
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A Step Toward Controlling Soybean Rust
… as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien … soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in 2010.       …
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Game On: High School Students Drive Everglades Metagenomics Study
… her thoughts about the experience below. In the summer of 2018, Jonathan Benskin was preparing to teach a second year … training for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample analysis.  The … Education (E4) community-building workshop at the  2019 Association for Environmental Studies and Sciences …
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