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Prokaryotic viruses impact functional microorganisms in nutrient removal and carbon cycle in wastewater treatment plants
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core … The UEC represents the JGI user community and is responsible for providing input and advice on JGI … external advisory body, the JAC includes representatives from all specialized JGI advisory and executive committees. …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… Innovative technology from this biomanufacturing collaboration is available for … Materials strategic initiative aims to enable the JGI user community to participate in the development and … million annually.  The team is working on developing new microbial strains that can synthesize other bio-based …
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Natural Prodcast Episode 3: The Primer, Part 3
… able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the … Something that’s you know …  ALISON: Central! DAN: That’s why they called it that! But for, maybe, people who are less … thrust that we’re interested in doing. So we need the community.  And one of the other great things about …
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Institutional User Agreements
… Every approved proposal starts with a User Agreement — before any work can begin, … and delays on the work. The transfer of a proposal from one commercial institution to a new commercial … Before work can begin on proposals submitted by researchers from another DOE National Laboratory, a JGI-BDLUA ,  BDLUA …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical Minerals and Materials … Access to the Molecular Foundry and use of JGI capabilities … and shipping; JGI will handle all subsequent processing from that point. JGI provides users with various outputs …
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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline … access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated …
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JGI@25: Using Team Science to Build Communities Around Data
… the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes … these initial efforts: Spatafora and Jason Stajich from UC Riverside would focus on broad sampling of early …
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How to Target a Microbial Needle within a Community Haystack
… The Impact Despite great strides in generating genome sequences for members of the microbial world through bulk community sequencing (metagenomics) and single-cell … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … platform enables users to validate hypotheses generated from mining genomic data by designing and assembling …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Florida, they encompass a wide range of ecosystems ranging from wetlands to tree islands to cattails. In 2018, the US … on a pilot project with biology students from Boca Raton Community High School in Palm Beach County, Florida. The … the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall Loxahatchee …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the … published in the journal  Developmental Cell and provides a community resource that could help researchers track cell … the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in …
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