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JGI-TMF Critical Minerals and Materials Call
… call represents a unique opportunity for researchers to request the capabilities and expertise of both the Joint … metabolomics and analysis will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. All JGI data is made …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for Reconciling “Real” Big Data For the team, the …
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology … We focus our efforts on integrating database mining and sequence design with scaling the production of large, … novel enzymatic activities using phylogenomic driven approaches, and understanding the design principles for …
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Niche differentiation of bacteria and fungi in carbon and nitrogen cycling of different habitats in a temperate coniferous forest: A metaproteomic approach
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Natural Prodcast Episode 21: Elizabeth Parkinson
… DAN: All right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. … The genes are pretty much 100% identical. We don't know why one is expressed over the other. As far as whether we're … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain …
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Game On: High School Students Drive Everglades Metagenomics Study
… Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in … class decided to do an environmental microbial community (metagenomic) soil study in an untouched region of the … samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science … and improved upon a tool that combines existing DNA sequence binning algorithms, allowing them to reconstruct … changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of …
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Alabama Agricultural & Mechanical University Internship Program
… their scientific skills and collaborating with their mentors and fellow interns. Inspired by the success of the UC … program, they left the JGI more confident and ready to tackle real-world scientific issues. Our interns say their experiences allowed them to:  Learn new skills. Experience industry-level work and …
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User Advisory Committees
… of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core … the relationships we nurture in our workplace and seek to establish with our stakeholders. The guiding principles … and the annual meeting. The UEC also acts as a liaison to the user community and the broader scientific community, …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the … Something that’s you know …  ALISON: Central! DAN: That’s why they called it that! But for, maybe, people who are less …
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Synthetic Biology Informatics Group
… gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination … For further details, please reach out to the Group Lead …
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Cataloging the Microbes that Manage the Health of River Systems
… United States. They also provided multiple access points to the information. The team harnessed a community-science program to collect samples from across the country to standardize … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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