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Synthetic Biology Informatics Group
… gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …
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Secondary Metabolites Program
… for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in … tools for their characterization, the program strives to facilitate the discovery of new bio-based molecules that can … computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, …
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Accessibility/Section 508 Statement
The U.S. Department of Energy is committed to making its electronic and information technologies accessible to individuals with disabilities in accordance with Section … as amended in 1998.   Send feedback or concerns related to the accessibility of this website to DOE Section 508 …
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Natural Prodcast Episode 14: Nigel Mouncey
… 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from here I can get … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We … and forget. [LAUGHTER] Sorry!  NIGEL MOUNCEY: I think belonging to society really does give you the chance to …
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Scientific Advisory Committee
Committee (SAC) is a board convened by the JGI Director to provide a scientific and technical overview of the JGI. … and Environmental Research (BER) program, set the final sequence allocation for this program. …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …
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University of California, Merced Internship Program
… at the JGI, the Genomics Internship Program soon expanded to include undergraduate students. To date, more than 80 UC Merced students have contributed to the research of numerous JGI scientists. Interns say …
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Alabama Agricultural & Mechanical University Internship Program
… their scientific skills and collaborating with their mentors and fellow interns. Inspired by the success of the UC … program, they left the JGI more confident and ready to tackle real-world scientific issues. Our interns say their experiences allowed them to:  Learn new skills. Experience industry-level work and …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the … Something that’s you know …  ALISON: Central! DAN: That’s why they called it that! But for, maybe, people who are less …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s … at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … framework provided by these high quality reference genome sequences could help researchers better understand related …
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User Programs
Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING … integrate the expertise and capabilities of multiple user facilities Investigators with DOE mission-relevant projects …
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