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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific … The Impact Despite great strides in generating genome sequences for members of the microbial world through bulk community sequencing …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, …
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, … genomic biodiversity. Using publicly available genome sequence data generated over the past three decades, their …
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge … through end-to-end automation, and further advancing sequence applications, single cell genomics, DNA synthesis, …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that … tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …
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Natural Prodcast Episode 17: Cassandra Quave
… … Dan Udwary: Hey everybody! Welcome back for Natural Prodcast … culture-disconnected. Like we’ll take some soil samples and sequence all the bugs out of that or whatever. And so I was … methicillin-resistant Staphylococcus aureus . Can you share why finding treatments for these microbes is so important? …
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User Executive Committee Charter
JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users …
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Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new … the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed 3 Tb in total. Proposals … mission relevance , proposed data usage by the applicant/community, and track record of the applicant.  Learn about …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The … time of publication, it is the largest repository of BGC sequence data from over 1.3 million publicly available … a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts …
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