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… and secondary metabolites information from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed … Office of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. … SMC is the most comprehensive BGC database … at 10X the scale of the closest comparable database. … Dan Udwary talks about the Secondary Metabolism …

As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting … multiple DOE facilities with a single proposal. From the vantage point of JGI’s 25 years fueling discovery, Anderson … and technological landscape.” Scientific Impact Takes Time Dan Drell , Former DOE program manager for the Joint Genome …

Developed in 2017, the PDT was established in part to help better-connect … help drive discoveries that will render new economic advantages for farmers concerned with improving sustainable soil … is considered the most efficient method of converting abundant low-cost gas feedstock into valuable bioproducts, but …

… our Illumina and PacBio sequencing workflows and provide guidance as to how to perform sample QC prior to shipment: … Weight DNA extraction and quality control (from PacBio) 2) Review guidelines detailing quantity and quality … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …

Natasha Brown Supply Chain Manager Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy Hammon Workflow …

Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint … in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et al ., gRNA-SeqRET: a universal tool for …

On February 17, 2021, JGI and the Environmental Molecular Sciences … to contact? A:  Contacts are listed on the proposal call page. Feel free to  reach out to any of them with questions. … range from traditional single cell sequencing and mini-metagenomics to more targeted approaches, such as …

… a more systematic picture through single-cell and metagenomic sequencing. A team co-led by Mária Džunková, … and archaeal cells — and detected the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then … found, how prevalent in the mat are their viruses? The abundance of a virus relative to its host (inferred through …

… researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  … of stable, synthetic microbial communities to take advantage of their joint metabolisms. Because, together, microbes … Northen teamed with longtime JGI collaborator Jeffery Dangl at the University of North Carolina at Chapel Hill, …