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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… and hard work have carried it through the difficult early stages, so I can begin biological analysis of the data sooner … Internship Program has been a pillar stepping stone in my bioinformatics learning and career development,” she noted. …
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A Natural Mechanism Can Turbocharge Viral Evolution
… sampled all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and is … to support the idea. Study coauthor Stephen Nayfach, a JGI bioinformatics research scientist, found that pieces of …
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JGI@25: Strengthening Soybean
… rotation, but soybean ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and energy advantages explain why soybean is a flagship genome of the JGI’s … evolution of sequencing technologies and the evolution of bioinformatics.”  P. pachyrhizi has a very large and complex …
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Natural Prodcast Episode 22: Alison Narayan
… nature does this with such elegance And also to take advantage of the biological properties that these molecules have … to test that hypothesis through site-directed mutagenesis, we would end up with dead enzymes. So often, when …
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Making a Lichen Together
… by a three-year subcontract to DA, FL, and FD (for bioinformatics) from a DOE grant No 112442 to Pacific …
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Natural Prodcast Episode 9: Roger Linington
… the idea that you could go internationally to do the next stage of your training and that there might be more to be … how best to begin. And so in the end, we did it in several stages. So we started out internally by making a list on the … a sort of front end tool, so it’s being used as the first stage in discovery. There are so many different ways that you …
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The Power of One, Amplified
… of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated the … sequencing approaches including amplicon and metagenomic sequencing. For example, they showed that the … through metagenomics. Such techniques take advantage of bioinformatics tools for  extracting snippets of microbial …
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High-Quality Draft Genome Sequence of the Opitutaceae Bacterium Strain TAV1, a Symbiont of the Wood-Feeding Termite Reticulitermes flavipes
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Accelerating Metagenomics Discoveries with Deep Learning
… in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole … (CRD), in order to create more useful tools for the bioinformatics community. Other work presented at the …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Ph.D. student significantly, and positively, influenced the bioinformatics skillset I have today. I didn’t know anything … more advanced in my understandings than I would be at this stage without the internship and mentorship that followed. I …
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Complete Genome Sequence of the Opitutaceae Bacterium Strain TAV5, a Potential Facultative Methylotroph of the Wood-Feeding Termite Reticulitermes flavipes
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Genomic Comparison of Two Family-Level Groups of the Uncultivated NAG1 Archaeal Lineage from Chemically and Geographically Disparate Hot Springs
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