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The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes
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Natural Prodcast Episode 13: Francisco Barona Goméz
… about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with episode … from that. Evolution doesn’t invent stuff to see what happens and keep it alive for a while. It does it because it’s … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. … different pieces of her work, including bacterial quorum sensing and its effects on regulation of natural product … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … to the audience, I guess. JACLYN WINTER: We’ll see what happens. DAN UDWARY: OK. One of the– I don’t know. Maybe we ask … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a …
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Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have … through nitrogen-fixation and holds clues for maximizing soybean, the common bean’s close relative, as a biofuel. To … of the JGI; and Scott Jackson of the University of Georgia sequenced and analyzed the genome of the common bean. That …
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Project Management Office
… PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working … launching the user’s project. See below for details on each step. … Please review our FAQ in advance of contacting the PMO office.  … Before work can start on any approved proposal – including the submission of …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings … from academia, industry, and government organizations for three days of scientific presentation, interactive …
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JGI Portals
… new algorithms, models and tools in support of DOE mission priorities. Data discoverability and accessibility are … the use of an ORCID account with two-factor authentication enabled to log in. Check our Help Site for additional information, including a Login Walkthrough and FAQ . …
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DNA Synthesis Program
… of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing … Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of …
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Natural Prodcast Episode 6: Marc Chevrette
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode 6 … at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … all microbes can produce secondary metabolites? Give me a sense of this kind of functionality. MARC: Some are more …
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Jeremy Schmutz
… working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed the pipelines for directed finishing and co-led … DOE human chromosomes 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed …
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