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… users through a BER data ecosystem.  A data ecosystem is a connected resource where data from different organizations is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, EMSL and the Protein … specifically optimized for high-performance computing environments. …

… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and …

… Analysis reveals cotton genome stability across global lineages . Come harvest … darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed … 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, … J et al. 2010. Genome sequence of the palaeopolyploid soybean. Nature 4637278: 178-183. …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … cannot be cultivated under laboratory conditions, their genomes can’t be sequenced using traditional approaches. …

… Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User Science calls. These documents have been shared … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated temperatures …

… As a National User Facility, the JGI serves more than 2,500 users … from the public sector: academic and government institutions — with capabilities that had remained largely unknown … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …

… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple … chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene …

… In honor of the JGI's 25th anniversary in 2022, we have … through nitrogen-fixation and holds clues for maximizing soybean, the common bean’s close relative, as a biofuel. To … of the University of Georgia sequenced and analyzed the genome of the common bean. That work was published online …

… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science capabilities to support BER's mission of achieving a predictive understanding of complex …

… clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … lichens. Studying the symbiosis by investigating a lichen’s genomes and transcriptomes could help inform efforts at …

… natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg … Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Berkeley National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and …