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Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria
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Community Science Program
… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic … biological function. The  New Investigator and Functional Genomics calls do not require an LOI.  Projects will be …
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Cultivating Symbiotic Antarctic Microbes
The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in environmental processes … growth because they had larger genome sizes and their cells were not observed to associate with host cells. In …
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. … from The Ohio State University and the University of Michigan studying how virus infections cause significant … Researchers have the opportunity to combine the power of genomics and molecular characterization offered at multiple …
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Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … about natural products and the science and scientists of secondary metabolism. Welcome back. This will be episode … product reports on the evolution of genome mining and microbes with Mohammad Alanjary and Tilmann Weber to be a …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … ecosystem. Their trust hinges on sustaining our record of excellence and respect, and for principles of integrity, …
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DOE Metrics
… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2024 DOE Metrics There … (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2024 …
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Metabolomics Technology Group
Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is … and dynamic metabolite networks of environmental microbes and how they transform their environment. Research …
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A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities
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The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environments.
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Plotting a Model for Virus-Host Warfare Deep Below Ground
Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … nitrogen, but the viruses that infect Altiarchaea cause the cells to burst. This action triggers subsurface carbon …
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