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… , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the … of the virus and plasmid workflows for the National Microbiome Data Collaborative.  This award recognizes …

… for User Science calls. These documents have been shared with permission from the PIs who drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at … Characterization of simplified soil communities with high and low carbon use efficiency across differing …

… faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the … classroom modules Currently 206 genomes have been selected with 11 published manuscripts published to-date Testimonials: …

… Genomics Inc. in Chicago, IL. He did his postdoctoral studies with Carl Woese at the University of Illinois at … National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome Data … AP. et al. (2023) Identification of mobile genetic elements with geNomad. Nat Biotechnol . Epub. Neri U. et al. (2022) …

… genomes and directly link functional information with individual cells. Research Team    … analytical standards to accurately measure environmental microbiome activity levels.This functional assay lets us … and sequence microbial aggregates after first imaging with various microscopy techniques …

… the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the … analytical standards to accurately measure environmental microbiome activity levels. Learn more about SIP …

… displacing these important cold-water communities of algae with warm-adapted ones, a trend that threatens to … in algal communities, including the algae-associated microbiomes that influence algal diversity and gene … surface temperature to rise. “What needs to be done is reducing the production of CO2 — this is the first and …

… genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their … example” of how a 1000 Fungal Genomes project can enable studies of plant root microbiome and other microbiomes by providing reference … of the U.S. DOE under Contract No. DE-AC02-05CH11231 within the framework of CSP 1974 “1KFG: Deep-sequencing of …

… Plant microbiomes hold the amazing ability to influence plant … of their bacterial host to colonize plant roots, as with Arabidopsis thaliana. Using a coupled experimental and …

… of California (UC), Merced graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head … . Her research project, “Microbial Community Structure and Methane Production in California’s Canal System,” focuses on anthropogenic impacts on wetland microbiome composition and metabolism, work on which she is …