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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. … proposals).  For accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the … about the general review process or get details on the internal synthetic biology review process .  …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in the evolution and transition of fungi from aquatic to terrestrial habitats. The work is part of the JGI’s 1000 … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, … co-lead author of the study with Kara Martin. “But these ecosystems are literally melting away.” Driven by climate …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… webinar featured  Trent Northen and Ben Bowen of the  JGI Metabolomics Program , along with Jenny Mortimer, Director … researchers worldwide.  Q:  To what extent is natural soil a limit to identify molecules exchanged between plants … Data Analysis – Tips from Users page.  Q:  Is the metabolic study able to build a profile for a not very well …
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Mission
… expertise to support the global research community in studies of complex biological and environmental systems. … our service to the community through responsibly managing our people and resources. Our vision is to lead AI-driven genomic innovation to advance biotechnology.   …
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Institutional User Agreements
… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … with an active JGI User Agreement older than January 2024 will be required to execute a 2024 version .  The …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a … effort, researchers have identified a protein in soil viruses that may promote soil health. The work was … on hidden components, including genes called auxiliary metabolic genes (AMGs) that have nothing to do with a virus’ …
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Natural Prodcast Episode 19: Bill Fenical
… of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … in a way that’s similar or analogous to what’s going on in terrestrial systems with plants making toxins and so on and … are many others, including Streptomycetes, which are common soil bacteria. DAN UDWARY: Yeah, we talk about them a lot …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … in the area of biosynthesis, enzymology, and working with terrestrial organisms. And – but I knew all along right from … in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in plants, fungi, and …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology … The research efforts of the group have concentrated in demonstrating the power of data science in tackling grand …
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of … within the soil. To get a clearer picture of how burned ecosystems return to health, researchers have taken a look …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… Register here Book your stay at the conference venue This inaugural event will bring together researchers across major ecosystems and disciplines who are developing and applying … the future of microbiome science. Organizers The EcoFAB 2025 Conference is organized by the EcoFAB Steering …
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