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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring … by generating data in three overarching categories: DNA Sequencing , Biodesign and Metabolomics .  Many users rely on a multifaceted combination of genomic, transcriptomic, proteomic, phenotypic, …
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Analyze Data
… The JGI supports the entire data life cycle — from experimental design to reuse. Armed with … The JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work with our partners to build infrastructure in support of new analysis techniques.  …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other bioenergy solutions.  … project. These advancements contribute to the development of new biofuels and sustainable biochemicals. The DNA …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific … relevant bioenergy and environmental problems.  The mission of the National Energy Research Scientific Computing Center … ( NERSC ) is to accelerate scientific discovery at the DOE Office of Science through high performance computing (HPC) …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential … before this study. A statistical comparison of evolutionary trees built from mitochondrial and nuclear genomes showed … The next step applied metagenomic binning (grouping sequencing reads by their likely organism of origin) …
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Towards a balanced view of the bacterial tree of life
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … become your parent anymore, but has this other role in your life. A colleague, ya know, a teacher in many ways. And so … Bill Fenical. And we connected to JGI through the Community Sequencing Program, and they worked with us to sequence two …
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … based on their DOE relevance.  For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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THE Bioenergy Tree
… The US Department of Energy’s favorite tree is poplar. They’re the fastest growing trees in the Northern Hemisphere, making them tantalizing …
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Igor Grigoriev
… the pharmaceutical industry. He holds joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist … at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … gene clusters. And I had heard the first rumors of people sequencing like these enormous numbers of genomes, like 20 … are protecting the plants against pathogens. So usually fungal or oomycete pathogens. In this case they worked on a …
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Shed Light in the DaRk LineagES of the Fungal Tree of Life—STRES
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