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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific … plan is written into a Statement of Work document. … For sequencing projects, once work is under way, raw sequence … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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THE Bioenergy Tree
The US Department of Energy’s favorite tree is poplar. They’re the fastest growing trees in the Northern Hemisphere, making them tantalizing …
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CSP Large Scale Call
… on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon … and track record of the applicant. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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Igor Grigoriev
… the pharmaceutical industry. He holds joint appointments as Fungal and Algal Program Head at the DOE Joint Genome … Miyauchi et al (2020) Large-scale genome sequencing of mycorrhizal fungi provides insights into the … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … biofuels by studying perennial grasses and fast-growing trees as renewable energy feedstocks. It also tackles … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Natural Prodcast Episode 6: Marc Chevrette
… the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept breaking our methods … do your organic reaction and see if it smells like a pine tree. Like there’s no cookie cutter reactions here, we’re … this and deal with it is through these antibiotic- or antifungal-producing bacteria that live on the exoskeleton of …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … gene clusters. And I had heard the first rumors of people sequencing like these enormous numbers of genomes, like 20 … are protecting the plants against pathogens. So usually fungal or oomycete pathogens. In this case they worked on a …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … of Energy.   The JGI provides integrated high-throughput sequencing, DNA design and synthesis, metabolomics and … development. Develop an understanding of microbial and fungal metabolism necessary to design communities, new …
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Shed Light in the DaRk LineagES of the Fungal Tree of Life—STRES
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1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
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Multisubstrate specificity shaped the complex evolution of the aminotransferase family across the tree of life.
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Programs & Platform Leads
… the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon … JGI researchers drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …
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