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Frequently Asked Questions: Proposal Submission
See below for a list of Frequently Asked Questions about our proposal submission … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … the metabolome into well plates. And we can use our fancy multiplexed activity metabolomics method to tell us what’s … of what’s out there so that we can do more comparative analysis and maybe– I don’t know– start to put some of these …
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Metagenomic analysis of the ET‐743 producer
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Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
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Multiple whole-genome alignments without a reference organism
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CSP New Investigator Call
… initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead … projects will provide pilot data to assess feasibility of a novel approach or form the foundation for a large-scale … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … protocol,  detailed in the journal  Microbiome , combines multiple techniques and was demonstrated using a specific … cytometry when using standard FISH probes, so the signal amplification provided by HCR-FISH is critical for …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … a combination of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity … but highly recommend using the workflow in  GNPS2 .   … In support of user science, the JGI Metabolomics …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … in the continental United States. They also provided multiple access points to the information. The team … Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing …
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Metagenomic analysis of a stable trichloroethene-degrading microbial community
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IMG/M: a data management and analysis system for metagenomes
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Viral Genomics Group
… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … Genomics group . Research Team … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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