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Natural Prodcast Episode 15: Katherine Duncan
… was really before– or kind of around about when the first genome sequencing was done. But natural products– marine … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … Foskett Brown family. … Miscanthus sinensis genome … CABBI Sequences Miscanthus Genome … Datasets … From our partners …
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Natural Prodcast Episode 18: A CSP Primer
Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Special Initiatives & Programs
… ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on … set, or the refining of new technology (e.g., single-cell genomics; metagenomics, etc.).   The faculty-level scientist …
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David Goodstein
… gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic systems as the JGI’s eukaryote research … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To … to advancing the frontiers of environmental and energy genomics.  For more information about the science depicted, …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic … methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … – that’s pretty remarkable.” Adding Value Beyond Genome Sequences Much of the data had been generated from …
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Data Ecosystem
To expand access to integrated data, improve tools and … cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, … all five cotton lineages and of cotton D are available for comparative analysis on JGI’s plant data portal  Phytozome , … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Help from Citrus’ Bitter, Hardier Cousin
The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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