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DNA Synthesis Program
… & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … Inventory of Composable …
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Metatranscriptomic Sequencing of a Cyanobacterial Soil-Surface Consortium with and without a Diverse Underlying Soil Microbiome
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Variation in Root Exudate Composition Influences Soil Microbiome Membership and Function
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Metabolomics
… metabolomics enables functional genome annotation, improves understanding of the role small molecules play in diverse … they grow, as well as different types of environments (e.g. soil, lake).  A wide range of metabolites are identified …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… this alga reveals a remarkable ability to adapt to stress and rapid environmental changes. Researchers were … — near the surface where algae grow. Armed with a better understanding of the alga’s stress resistance and ability to … gene expression, to determine which genes are active under different conditions. This was facilitated in part by …
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Plant compartment and genetic variation drive microbiome composition in switchgrass roots
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. … years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver …
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Partners
DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to …
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Project Management Office
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Natural Prodcast Episode 24: Jackie Winter and SMC
Don’t get me wrong. But I also was kind of wavering between going into academia and industry. And I always liked … And so we also sequence a lot of fungi, and we sequence plants. And so we started thinking about if we had a … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Novel and Emerging Capabilities that Can Provide a Holistic Understanding of the Plant Root Microbiome
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FICUS-NERSC/KBASE
… for consideration in the next review cycle. All proposals undergo technical review by JGI staff as well as staff at … basis, in accordance with JGI’s data release policy.  Interactions with applicants and others who might be … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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