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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Right, because they’re so reactive. BEN: …going back to the 1950s. But the structure of which was not known until the … right? BEN: Yeah, yeah. Well, we are at [10 to the] minus 12 [Molar concentration]- is sufficient to kill cells. So …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome … at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University … in human and mouse triglyceride metabolism. He is funded by DOE and through continued competitive grant support from …
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Secondary Metabolites Program
… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. Studying … algae and plants. These compounds are key to organisms' interactions with their environments and with each other, …
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Massively parallel sequencing identifies the gene Megf8 with ENU-induced mutation causing heterotaxy
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Neurospora intermedia from a traditional fermented food enables waste-to-food conversion
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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Webinar: MycoCosm Tutorial
… data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Do you accept oomycetes to be proposed for … ) on PhycoCosm tree with several sequenced genomes. 2.  Q: How exactly EcoGroups are built? A: EcoGroups are … While are still working on finalizing the tree and related publication the tree is still in development and not …
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How to Submit Sequencing Samples
… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and … 1) Review JGI sample QC requirements and protocols Obtaining … Weight DNA extraction and quality control (from PacBio) 2) Review guidelines detailing quantity and quality …
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Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential
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Refining the Process of Identifying Algae Biotechnology Candidates
… can be refined for best results, often by starting with identifying the right ingredients. Researchers collaborating … feedstocks, algae are tiny but mighty. An analysis in the 2017 Bioeconomy Report estimated that the United States has … U.S. Department of Energy under Contract No. DE-AC02-05CH11231. …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency declared the North … contributing to bioremediation efforts for decades. Identifying resident microbes that can help bioremediate … type of food that was in the contaminated aquifer in 2007 to achieve this goal. In less than four years, parts of …
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Natural Prodcast Episode 5: Brad Moore
… Natural Products conference, which took place last January 2020 in San Diego. San Diego, of course, is the “home turf” … pairs. It was not linear, like Streptomyces , but circular. 10% of the genome encoded natural product pathways. Dan: … cool because the work has gone so much more than just identifying genes to that toxin, but it’s opened up this …
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