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Natural Prodcast Episode 16: Marcy Balunas
As much as we incorporate loads of different kinds of biology, one of the best things that we do is work with this … to do an independent study on ethnobotany of some of the plants that people were using for medicines in this very … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much …
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The F-Box Gene Family Is Expanded in Herbaceous Annual Plants Relative to Woody Perennial Plants  
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Natural Prodcast Episode 9: Roger Linington
… my hotel room at SIMB, or the Society for Industrial Microbiology conference that took place in January this year in … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to … and screening, structure elucidation, and chemical biology. In recent years, his group has turned to some …
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Natural Prodcast Episode 8: Eric Schmidt
… sponges, can you maybe explain what’s going on with their biology and why they’re so important to natural products? … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Natural Prodcast Episode 18: A CSP Primer
… info about the CSP, FICUS, New Investigator and Functional Genomics calls. For my audience, all of these programs can … our eukaryotic genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes into generating … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Secondary Metabolites Program
… of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for … metabolites produced by bacteria, fungi, algae and plants. These compounds are key to organisms' interactions … The Secondary Metabolites Program offers users extensive genomics, DNA synthesis and metabolomics capabilities to …
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Natural Prodcast Episode 5: Brad Moore
… the mid-late ’80s. And at that time, you know, it’s before genomics existed. This is before we’re even thinking of … chemicals that are coming out of organisms, whether it be a plant or from the bottom of the ocean, from a sponge, or a … discoveries being made, and then connecting that to biology was pretty darn exciting. So that was this era of …
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A Plant Root Atlas for Tracking Developmental Trajectories
… the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in … developed for this purpose by the JGI plant comparative genomics data portal  Phytozome and will be available for … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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Natural Prodcast Episode 6: Marc Chevrette
… by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a … As a host, and a little bit of my newer work is focused on plants, but in both cases, you know, these molecules are how … do your organic reaction and see if it smells like a pine tree. Like there’s no cookie cutter reactions here, we’re …
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Frequently Asked Questions: Project Management
Phycocosm (citation: https://doi.org/10.1093/nar/gkaa898 ) Plants: Phytozome (citation: … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … … work done by the JGI. More information is available in our Publications Policy on our Data Policy & Support page.  … …
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CSP Large Scale Call
… approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon … work will NOT be considered under this program. Plant pathogens will only be considered if they are of … review process or get details on the internal synthetic biology review process .  … Proposers are encouraged to …
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User Support
… access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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