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Natural Prodcast Episode 18: A CSP Primer
… info about the CSP, FICUS, New Investigator and Functional Genomics calls. For my audience, all of these programs can … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … Microbes. We’ve done those in the past, but the DOE mission changes over time. Yeah. We don’t often get a lot of calls. …
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Special Initiatives & Programs
… ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … are NOT eligible for BERSS support through the JGI (with the exception of DE-FOA-0003453, which is eligible for … and Environment (iSEE) and the Carl R. Woese Institute for Genomic Biology (IGB), and it will include 17 partner …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group … gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate … Yeast recombination and Golden Gate methods SynTrack and associated tools, which track samples through the JGI’s …
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Natural Prodcast Episode 3: The Primer, Part 3
… drug discovery train moving, drug companies started working with some techniques referred to as “combinatorial … can see how they work, we can’t always see how to make the changes to make them do whatever we want them to do. And … of biology. You know, I’ve personally been able to work in genomics, in protein structure, in synthetic biology, …
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Ancient Algae Reveal Secrets of Plant Evolution
… in sustainable agriculture and clean energy. These evolutionary strategies that helped plants thrive under … resilient crop varieties able to grow in marginal lands and with minimal resources. Enabling the use of non-arable land … algae and land plants. Researchers identified key genes associated with stress responses and compared them with …
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JGI@25: Using Team Science to Build Communities Around Data
… for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … a more straightforward way to connect genes and infer changes in gene function across the phylogeny — and link …
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Natural Prodcast Episode 19: Bill Fenical
… and we talk about an ongoing project I’ve been working with him on as an exploration into the secondary metabolism … that improve their survival. Those molecules, over evolutionary time, become targeted to certain biological … in the process. We now have cell pellets. And we’re pulling genomic DNA out of those cell pellets. So, we’re about ready …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. … that showcase our collaborations and capabilities to enable great science that will help solve energy and …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute … we nurture in our workplace and seek to establish with our stakeholders. In working toward a shared vision … Fagnan, Chief Informatics Officer Len Pennacchio, Deputy of Genomic Technologies Axel Visel, Deputy for Science Programs …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… plant lineages makes it ideal for comparative genomics studies, offering insight into genes critical for … a resource that associates plant’s genetic variants with specific adaptation mechanisms they had identified. For … expanded. Along with NLRs, the diversified peroxidases are associated with adaptation strategies in  Marchantia  and in …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… lead the Forest Pathology and Mycology Laboratory. Together with his colleague Douglas Schmidt and UC Davis professor … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … Tyler BM et al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis . …
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The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants
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