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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … a core facility instead. Proposals may not exceed 10 Tbp sequencing, 500 kbp synthesis, and 200 polar/500 nonpolar …
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Mapping N-Linked Glycosylation Sites in the Secretome and Whole Cells of Aspergillus niger Using Hydrazide Chemistry and Mass Spectrometry
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – sequences … This the third episode of Natural Prodcast, and the third and final part of our …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support … and novel automations for DNA design, assembly and analysis Overview of biodesign products The JGI Biodesign platform enables … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is …
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Dissecting the complex regulation of pentose utilization in Aspergillus niger
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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … staff to onboard users and guide them through the process of working with our facility. This includes help with: … Please review our FAQ in advance of contacting the PMO office.  …
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Detailed analysis of the D-galactose catabolic pathways in Aspergillus niger reveals complexity at both metabolic and regulatory level
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And … pellets. So, we’re about ready to send those for genomic analysis. And of course, we don’t know anything about the …
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … is similar to primary metabolism. So if you were, you know, sequencing an organism for the first time, and you’ve never … This the second episode of Natural Prodcast, which continues a conversation from the …
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