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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … derivatives of natural products.  ALISON: Like such a large diversity can have similar effects, I think is also really … of weird growths on livestock due to you know, bacterial or fungal infections. Yeah, okay. So he identified these things …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … DAN: Welcome back to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting … episode is our conversation with Nancy Keller, a fantastic fungal natural products researcher from the University of …
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Metabolomics
… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that …  Through this identification, metabolomics enables functional genome annotation, improves understanding of the … JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental samples using …
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of … aims to advance genome science-based scientific research from a broad range of disciplines. Three calls fall under … call is for PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as … as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … calls. These documents have been shared with permission from the PIs who drafted them.  …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a … drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, … Metabolites, and DNA Synthesis Science Programs and draw from the infrastructure of Genomic Technologies and Data …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal … such as nutrient transporters, were co-opted into symbiotic functions. Recently published in  Nature Communications , … of Forest Soil Ecosystems project (CSP # 570) and the 1000 Fungal Genome projects (CSP # 662 & 1974). This research was …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … A data ecosystem is a connected resource where data from different organizations is discoverable and accessible. Linking the resources of powerful institutions like the JGI, … (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas …
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JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique opportunity … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, … review by JGI staff as well as staff at the other participating facilities, who consider technical feasibility and …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential … as reliable markers for classifying species and studying diversity in complex biological systems. By making the tools …
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Natural Prodcast Episode 17: Cassandra Quave
… I’m talking about is called the Convention on Biological Diversity . And there’s something called the Nagoya Protocol … could be used to treat these highly resistant bacterial and fungal pathogens. And we’ve actually just wrapped up a year, … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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Genome Sequences of Actinobacteria from Extreme Environments in Colombia
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