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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … of the advisory committee and JLT members’ opinions; Proactively reach out to a member of the JLT when JGI-related …
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How Filamentous Fungi Sense Food
… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … fungi. The work also suggests a new approach to gene annotation, which then can be explored in depth for multiple … use of deletion strains generated by Grant P01 GM-068087 “Functional Analysis of a Model Filamentous Fungus” and that …
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Identification of novel biomass‐degrading enzymes from genomic dark matter: Populating genomic sequence space with functional annotation
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Sequencing Submission Requirements for DNA Synthesis
… add the characters “.gb” (no quotes, just .gb) to the end of your file name. …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … it’s really about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Machine learning-based prediction of activity and substrate specificity for OleA enzymes in the thiolase superfamily
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, … Right. Yeah. DAN: Alright, so a subset of proteins are enzymes. Enzymes are proteins that do chemical reactions. …
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Revealing enzyme functional architecture via high-throughput microfluidic enzyme kinetics
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Cellular assays identify barriers impeding iron-sulfur enzyme activity in a non-native prokaryotic host
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural … I wish we could predict. I wish we could look at these enzymes and predict, and really place it to structure. …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the DNA that was breaking the sequencing from really being functional was these secondary metabolite pathways. So why … secondary metabolites? Give me a sense of this kind of functionality. MARC: Some are more gifted than others. So a …
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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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