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User Programs
… and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user … FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status … Investigators with research interests that integrate genomics with nanoscale science in the area of critical …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel …
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Comparative Genomics Analysis of Trichoderma reesei Strains
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Genome Insider
… — JGI Users — and dives into their work on all kinds of organisms, from plants and fungi to microbes and viruses. …
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Natural Prodcast
… about natural products and the science and scientists of secondary metabolism. Natural products, secondary … metabolites all refer to the chemicals that make species unique and different from one another. They are … research, “Natural Prodcast” serves as an important line of communication to the scientific community. Host Dan …
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Industry Engagement Program
… joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the JGI’s portfolio of user companies. Now the Department of Energy is uniting National Labs and industry, including … funded by an industry partner to perform a defined scope of work using the JGI’s unique facilities, equipment, and …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring … .  Many users rely on a multifaceted combination of genomic, transcriptomic, proteomic, phenotypic, … analysis. To meet these needs, the JGI deploys state-of-the-art sequencers and platforms dedicated to synthesis, …
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A Community Resource for Secondary Metabolite Researchers
… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most living creatures for energy, growth and … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …
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Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma
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Phenogenomics reveals the ecology and evolution of Trichoderma fungi for sustainable agriculture
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Trichoderma: the genomics of opportunistic success
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … moved from the mitochondria into the nuclear genome over evolutionary time. They also discovered more than 6,000 … systems for energy and other applications. All annotations, comparative tools, and visualizations are publicly available …
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