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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Sequencing technology has changed dramatically over the last  … before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. … for over 20 years in order to better understand how the freshwater ecosystem works. When she set out to analyze 500 …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex wiring … — and integrated these data with single-cell gene expression maps. Together, the scale of data enabled by …
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Two decades of bacterial ecology and evolution in a freshwater lake
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Diversity and Distribution of Hydrocarbon-Degrading Genes in the Cold Seeps from the Mediterranean and Caspian Seas
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Disclaimer
… NOTICE Information from this server resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … neither the United States Government nor the University of California nor any of their employees, makes any …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … you to, say, go to your grandma’s backyard. To collect the diversity that exists in the 1940s? The answer is no! If … pitch them in two different categories. One is a geographic distribution. So they were collected from 108 countries and …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … by our research team surveying the genomic and phenotypic diversity across the natural range of switchgrass found that … had been collected from field work. When viewing the full distribution of switchgrass on a map, these 8X individuals …
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Biodiversity of Magnetotactic Bacteria in the Freshwater Lake Beloe Bordukovskoe, Russia
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CalTeach
… CalTeach is a program for undergraduate majors interested in developing a deep understanding of STEM teaching & learning. Their coursework focuses on STEM pedagogy, educational theory and promoting diversity, equity, and inclusion, with concurrent …   Internship Snapshots   …
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Unravelling viral ecology and evolution over 20 years in a freshwater lake
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Geochemistry and Mixing Drive the Spatial Distribution of Free-Living Archaea and Bacteria in Yellowstone Lake
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … it took 15 to 18 years before we were able to convince the diversity of marine ecologists that they needed to consider … then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with everything that’s …
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