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Biodesign
… platform enables users to validate hypotheses generated from mining genomic data by designing and assembling … characterized.    We provide custom DNA constructs:  Individually arrayed constructs, up to ~150 Kb in length  … Plus: SynTrack and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well as …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… and shipping; JGI will handle all subsequent processing from that point. JGI provides users with various outputs … here, which includes the capabilities offered by JGI through this user proposal call. … publicly available. If you're requesting DNA synthesis from JGI, there's also a material transfer agreement that’s …
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Outreach Stories
… Interested in reading more JGI intern and mentor success stories? Read more below. …
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DAS Tool for Genome Reconstruction from Metagenomes
… and validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies … compared to other methods. The Impact Understanding how individual microbes interact with each other in a community, …
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User Programs
… and metabolomics. Proposals must request capabilities from both JGI and the Molecular Foundry.  Submission …   Learn more about our individual calls and other opportunities to work with the JGI …
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Special Initiatives & Programs
… support for DOE-BER funded awards, including awards funded through  BER Funding Opportunity Announcements ,  Science … funding call, proposals are NOT eligible for BERSS support through the JGI (with the exceptions of DE-FOA-0003453 and … with grants funded by DOE-BER requiring support from the JGI may  submit proposals here . Investigators …
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Who We Are
… through analyzing and harnessing genomic information from plants, fungi, algae, non-medical microbes, microbial … access to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics through its data portals. … and bioproducts. The JGI continues to receive its support from the Biological and Environmental Research program in …
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The Big Deal About Short Plants
… Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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Meraculous: De Novo Genome Assembly with Short Paired-End Reads
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Natural Prodcast Episode 3: The Primer, Part 3
… maybe it’s a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about … DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the proteins that … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they …
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User Support
… Help Site for additional information, including a Login Walkthrough and FAQ . –– The JGI Project Management Office … specific milestones, either by automated emails or emails from your Project Manager. Your Project Manager will also … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been … protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a protein identified from …
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