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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host metabolism, gene … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus
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Natural Prodcast Episode 18: A CSP Primer
Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … process. So it’s really important to submit everything most completely. And then, there’s different sections that …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National …
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Community Science Program
… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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DOE Metrics
… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress … the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one new …
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Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds
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Refining the Process of Identifying Algae Biotechnology Candidates
… well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these … multiple institutions have sequenced and analyzed the genome of an alga that thrives in saltwater (halotolerant) … at the JGI led the multi-omics analysis effort for a more complete picture. The team annotated the algal genome and …
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Partnerships Development Team
… works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT … feedstock into valuable bioproducts, but many  Clostridium strains are difficult to engineer. Yasuo Yoshikuni and his … technology called chassis-independent recombinase-assisted genome engineering (CRAGE), which offers single-step genomic …
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